0.1.0 - ci-build

CQDG_FHIR_IG - Local Development build (v0.1.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions

: Ferlab.bio CodeSystem/data-type - TTL Representation

Active as of 2026-03-24

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:CodeSystem ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "data-type"] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div [ fhir:v "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: CodeSystem data-type</b></p><a name=\"data-type\"> </a><a name=\"hcdata-type\"> </a><p>This case-sensitive code system <code>https://fhir.cqdg.ca/CodeSystem/data-type</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">Raw-Sequencing-Reads<a name=\"data-type-Raw-Sequencing-Reads\"> </a></td><td>Raw Sequencing Reads</td></tr><tr><td style=\"white-space:nowrap\">Raw-Sequencing-Reads-R1<a name=\"data-type-Raw-Sequencing-Reads-R1\"> </a></td><td>Raw Sequencing Reads R1</td></tr><tr><td style=\"white-space:nowrap\">Raw-Sequencing-Reads-R2<a name=\"data-type-Raw-Sequencing-Reads-R2\"> </a></td><td>Raw Sequencing Reads R2</td></tr><tr><td style=\"white-space:nowrap\">Aligned-Reads<a name=\"data-type-Aligned-Reads\"> </a></td><td>Aligned Reads</td></tr><tr><td style=\"white-space:nowrap\">Aligned-Reads-Index<a name=\"data-type-Aligned-Reads-Index\"> </a></td><td>Aligned Reads Index</td></tr><tr><td style=\"white-space:nowrap\">SNV<a name=\"data-type-SNV\"> </a></td><td>Single Nucleotide Variants (SNVs)</td></tr><tr><td style=\"white-space:nowrap\">InDel<a name=\"data-type-InDel\"> </a></td><td>Insertions and Deletions (InDels)</td></tr><tr><td style=\"white-space:nowrap\">SV<a name=\"data-type-SV\"> </a></td><td>Structural Variations (SVs)</td></tr><tr><td style=\"white-space:nowrap\">CNV<a name=\"data-type-CNV\"> </a></td><td>Copy Number Variations (CNVs)</td></tr><tr><td style=\"white-space:nowrap\">Variant-Calls-Index<a name=\"data-type-Variant-Calls-Index\"> </a></td><td>Variant Calls Index</td></tr><tr><td style=\"white-space:nowrap\">Joint-Genotype-SNV<a name=\"data-type-Joint-Genotype-SNV\"> </a></td><td>Joint Genotype SNV</td></tr><tr><td style=\"white-space:nowrap\">Annotated-SNV<a name=\"data-type-Annotated-SNV\"> </a></td><td>Annotated SNV</td></tr><tr><td style=\"white-space:nowrap\">Quality-Control-Metrics<a name=\"data-type-Quality-Control-Metrics\"> </a></td><td>Quality Control Metrics</td></tr><tr><td style=\"white-space:nowrap\">Sequencing-Data-Supplement<a name=\"data-type-Sequencing-Data-Supplement\"> </a></td><td>Sequencing Data Supplement</td></tr><tr><td style=\"white-space:nowrap\">IGV<a name=\"data-type-IGV\"> </a></td><td>IGV</td></tr></table></div>"^^rdf:XMLLiteral ]
  ] ; # 
  fhir:url [
fhir:v "https://fhir.cqdg.ca/CodeSystem/data-type"^^xsd:anyURI ;
fhir:l <https://fhir.cqdg.ca/CodeSystem/data-type>
  ] ; # 
  fhir:version [ fhir:v "0.1.0"] ; # 
  fhir:name [ fhir:v "DataType"] ; # 
  fhir:title [ fhir:v "Ferlab.bio CodeSystem/data-type"] ; # 
  fhir:status [ fhir:v "active"] ; # 
  fhir:experimental [ fhir:v false] ; # 
  fhir:date [ fhir:v "2026-03-24T15:55:50+00:00"^^xsd:dateTime] ; # 
  fhir:publisher [ fhir:v "Ferlab.bio"] ; # 
  fhir:contact ( [
fhir:name [ fhir:v "Ferlab.bio" ] ;
    ( fhir:telecom [
fhir:system [ fhir:v "url" ] ;
fhir:value [ fhir:v "http://example.org/example-publisher" ]     ] )
  ] ) ; # 
  fhir:description [ fhir:v "Data Type"] ; # 
  fhir:caseSensitive [ fhir:v true] ; # 
  fhir:content [ fhir:v "complete"] ; # 
  fhir:count [ fhir:v "15"^^xsd:nonNegativeInteger] ; # 
  fhir:concept ( [
fhir:code [ fhir:v "Raw-Sequencing-Reads" ] ;
fhir:display [ fhir:v "Raw Sequencing Reads" ] ;
    ( fhir:designation [
fhir:use [
fhir:system [
fhir:v "https://fhir.cqdg.ca/CodeSystem/data-type"^^xsd:anyURI ;
fhir:l <https://fhir.cqdg.ca/CodeSystem/data-type>         ] ;
fhir:code [ fhir:v "Raw-Sequencing-Reads" ]       ] ;
fhir:value [ fhir:v "Raw Sequencing Reads" ]     ] )
  ] [
fhir:code [ fhir:v "Raw-Sequencing-Reads-R1" ] ;
fhir:display [ fhir:v "Raw Sequencing Reads R1" ] ;
    ( fhir:designation [
fhir:use [
fhir:system [
fhir:v "https://fhir.cqdg.ca/CodeSystem/data-type"^^xsd:anyURI ;
fhir:l <https://fhir.cqdg.ca/CodeSystem/data-type>         ] ;
fhir:code [ fhir:v "Raw-Sequencing-Reads-R1" ]       ] ;
fhir:value [ fhir:v "Raw Sequencing Reads R1" ]     ] )
  ] [
fhir:code [ fhir:v "Raw-Sequencing-Reads-R2" ] ;
fhir:display [ fhir:v "Raw Sequencing Reads R2" ] ;
    ( fhir:designation [
fhir:use [
fhir:system [
fhir:v "https://fhir.cqdg.ca/CodeSystem/data-type"^^xsd:anyURI ;
fhir:l <https://fhir.cqdg.ca/CodeSystem/data-type>         ] ;
fhir:code [ fhir:v "Raw-Sequencing-Reads-R2" ]       ] ;
fhir:value [ fhir:v "Raw Sequencing Reads R2" ]     ] )
  ] [
fhir:code [ fhir:v "Aligned-Reads" ] ;
fhir:display [ fhir:v "Aligned Reads" ] ;
    ( fhir:designation [
fhir:use [
fhir:system [
fhir:v "https://fhir.cqdg.ca/CodeSystem/data-type"^^xsd:anyURI ;
fhir:l <https://fhir.cqdg.ca/CodeSystem/data-type>         ] ;
fhir:code [ fhir:v "Aligned-Reads" ]       ] ;
fhir:value [ fhir:v "Aligned Reads" ]     ] )
  ] [
fhir:code [ fhir:v "Aligned-Reads-Index" ] ;
fhir:display [ fhir:v "Aligned Reads Index" ] ;
    ( fhir:designation [
fhir:use [
fhir:system [
fhir:v "https://fhir.cqdg.ca/CodeSystem/data-type"^^xsd:anyURI ;
fhir:l <https://fhir.cqdg.ca/CodeSystem/data-type>         ] ;
fhir:code [ fhir:v "Aligned-Reads-Index" ]       ] ;
fhir:value [ fhir:v "Aligned Reads Index" ]     ] )
  ] [
fhir:code [ fhir:v "SNV" ] ;
fhir:display [ fhir:v "Single Nucleotide Variants (SNVs)" ] ;
    ( fhir:designation [
fhir:use [
fhir:system [
fhir:v "https://fhir.cqdg.ca/CodeSystem/data-type"^^xsd:anyURI ;
fhir:l <https://fhir.cqdg.ca/CodeSystem/data-type>         ] ;
fhir:code [ fhir:v "SNV" ]       ] ;
fhir:value [ fhir:v "Single Nucleotide Variants (SNVs)" ]     ] )
  ] [
fhir:code [ fhir:v "InDel" ] ;
fhir:display [ fhir:v "Insertions and Deletions (InDels)" ] ;
    ( fhir:designation [
fhir:use [
fhir:system [
fhir:v "https://fhir.cqdg.ca/CodeSystem/data-type"^^xsd:anyURI ;
fhir:l <https://fhir.cqdg.ca/CodeSystem/data-type>         ] ;
fhir:code [ fhir:v "InDel" ]       ] ;
fhir:value [ fhir:v "Insertions and Deletions (InDels)" ]     ] )
  ] [
fhir:code [ fhir:v "SV" ] ;
fhir:display [ fhir:v "Structural Variations (SVs)" ] ;
    ( fhir:designation [
fhir:use [
fhir:system [
fhir:v "https://fhir.cqdg.ca/CodeSystem/data-type"^^xsd:anyURI ;
fhir:l <https://fhir.cqdg.ca/CodeSystem/data-type>         ] ;
fhir:code [ fhir:v "SV" ]       ] ;
fhir:value [ fhir:v "Structural Variations (SVs)" ]     ] )
  ] [
fhir:code [ fhir:v "CNV" ] ;
fhir:display [ fhir:v "Copy Number Variations (CNVs)" ] ;
    ( fhir:designation [
fhir:use [
fhir:system [
fhir:v "https://fhir.cqdg.ca/CodeSystem/data-type"^^xsd:anyURI ;
fhir:l <https://fhir.cqdg.ca/CodeSystem/data-type>         ] ;
fhir:code [ fhir:v "CNV" ]       ] ;
fhir:value [ fhir:v "Copy Number Variations (CNVs)" ]     ] )
  ] [
fhir:code [ fhir:v "Variant-Calls-Index" ] ;
fhir:display [ fhir:v "Variant Calls Index" ] ;
    ( fhir:designation [
fhir:use [
fhir:system [
fhir:v "https://fhir.cqdg.ca/CodeSystem/data-type"^^xsd:anyURI ;
fhir:l <https://fhir.cqdg.ca/CodeSystem/data-type>         ] ;
fhir:code [ fhir:v "Variant-Calls-Index" ]       ] ;
fhir:value [ fhir:v "Variant Calls Index" ]     ] )
  ] [
fhir:code [ fhir:v "Joint-Genotype-SNV" ] ;
fhir:display [ fhir:v "Joint Genotype SNV" ] ;
    ( fhir:designation [
fhir:use [
fhir:system [
fhir:v "https://fhir.cqdg.ca/CodeSystem/data-type"^^xsd:anyURI ;
fhir:l <https://fhir.cqdg.ca/CodeSystem/data-type>         ] ;
fhir:code [ fhir:v "Joint-Genotype-SNV" ]       ] ;
fhir:value [ fhir:v "Joint Genotype SNV" ]     ] )
  ] [
fhir:code [ fhir:v "Annotated-SNV" ] ;
fhir:display [ fhir:v "Annotated SNV" ] ;
    ( fhir:designation [
fhir:use [
fhir:system [
fhir:v "https://fhir.cqdg.ca/CodeSystem/data-type"^^xsd:anyURI ;
fhir:l <https://fhir.cqdg.ca/CodeSystem/data-type>         ] ;
fhir:code [ fhir:v "Annotated-SNV" ]       ] ;
fhir:value [ fhir:v "Annotated SNV" ]     ] )
  ] [
fhir:code [ fhir:v "Quality-Control-Metrics" ] ;
fhir:display [ fhir:v "Quality Control Metrics" ] ;
    ( fhir:designation [
fhir:use [
fhir:system [
fhir:v "https://fhir.cqdg.ca/CodeSystem/data-type"^^xsd:anyURI ;
fhir:l <https://fhir.cqdg.ca/CodeSystem/data-type>         ] ;
fhir:code [ fhir:v "Quality-Control-Metrics" ]       ] ;
fhir:value [ fhir:v "Quality Control Metrics" ]     ] )
  ] [
fhir:code [ fhir:v "Sequencing-Data-Supplement" ] ;
fhir:display [ fhir:v "Sequencing Data Supplement" ] ;
    ( fhir:designation [
fhir:use [
fhir:system [
fhir:v "https://fhir.cqdg.ca/CodeSystem/data-type"^^xsd:anyURI ;
fhir:l <https://fhir.cqdg.ca/CodeSystem/data-type>         ] ;
fhir:code [ fhir:v "Sequencing-Data-Supplement" ]       ] ;
fhir:value [ fhir:v "Sequencing Data Supplement" ]     ] )
  ] [
fhir:code [ fhir:v "IGV" ] ;
fhir:display [ fhir:v "IGV" ] ;
    ( fhir:designation [
fhir:use [
fhir:system [
fhir:v "https://fhir.cqdg.ca/CodeSystem/data-type"^^xsd:anyURI ;
fhir:l <https://fhir.cqdg.ca/CodeSystem/data-type>         ] ;
fhir:code [ fhir:v "IGV" ]       ] ;
fhir:value [ fhir:v "IGV" ]     ] )
  ] ) . #