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: Ferlab.bio CodeSystem/sequencing-experiment-source - XML Representation

Active as of 2026-08-05

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<CodeSystem xmlns="http://hl7.org/fhir">
  <id value="sequencing-experiment-source"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: CodeSystem sequencing-experiment-source</b></p><a name="sequencing-experiment-source"> </a><a name="hcsequencing-experiment-source"> </a><p><b>Properties</b></p><p><b>This code system defines the following properties for its concepts</b></p><table class="grid"><tr><td><b>Name</b></td><td><b>Code</b></td><td><b>URI</b></td><td><b>Type</b></td><td><b>Description</b></td></tr><tr><td>Deprecated</td><td>deprecated</td><td>http://hl7.org/fhir/concept-properties#deprecated</td><td>dateTime</td><td>The date at which a concept was deprecated. Concepts that are deprecated but not inactive can still be used, but their use is discouraged.</td></tr></table><p><b>Concepts</b></p><p>This case-sensitive code system <code>https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source</code> defines the following codes:</p><table class="codes"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td><td><b>Deprecated</b></td></tr><tr><td style="white-space:nowrap">GEN<a name="sequencing-experiment-source-GEN"> </a></td><td>Genomics</td><td/></tr><tr><td style="white-space:nowrap">TS<a name="sequencing-experiment-source-TS"> </a></td><td>Transcriptomics</td><td/></tr><tr><td style="white-space:nowrap">EPI<a name="sequencing-experiment-source-EPI"> </a></td><td>Epigenomics</td><td/></tr><tr><td style="white-space:nowrap">PRO<a name="sequencing-experiment-source-PRO"> </a></td><td>Proteomics</td><td/></tr><tr><td style="white-space:nowrap">MUL<a name="sequencing-experiment-source-MUL"> </a></td><td>Multi-omic</td><td/></tr><tr><td style="white-space:nowrap">CLI<a name="sequencing-experiment-source-CLI"> </a></td><td>Clinical</td><td/></tr><tr><td style="white-space:nowrap">TSC<a name="sequencing-experiment-source-TSC"> </a></td><td>Transcriptomic Single Cell</td><td>2026-07-27</td></tr><tr><td style="white-space:nowrap">GSC<a name="sequencing-experiment-source-GSC"> </a></td><td>Genomic Single Cell</td><td>2026-07-27</td></tr></table></div>
  </text>
  <url value="https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source"/>
  <version value="0.1.0"/>
  <name value="SequencingExperimentSource"/>
  <title value="Ferlab.bio CodeSystem/sequencing-experiment-source"/>
  <status value="active"/>
  <experimental value="false"/>
  <date value="2026-08-05T14:46:26+00:00"/>
  <publisher value="Ferlab.bio"/>
  <contact>
    <name value="Ferlab.bio"/>
    <telecom>
      <system value="url"/>
      <value value="http://example.org/example-publisher"/>
    </telecom>
  </contact>
  <description
               value="Experimental category of the experiment (Genomics, Transcriptomics, Epigenomics, Proteomics, Multi-omic, Clinical)."/>
  <caseSensitive value="true"/>
  <content value="complete"/>
  <count value="8"/>
  <property>
    <code value="deprecated"/>
    <uri value="http://hl7.org/fhir/concept-properties#deprecated"/>
    <description
                 value="The date at which a concept was deprecated. Concepts that are deprecated but not inactive can still be used, but their use is discouraged."/>
    <type value="dateTime"/>
  </property>
  <concept>
    <code value="GEN"/>
    <display value="Genomics"/>
    <designation>
      <use>
        <system
                value="https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source"/>
        <code value="GEN"/>
      </use>
      <value value="Genomics"/>
    </designation>
  </concept>
  <concept>
    <code value="TS"/>
    <display value="Transcriptomics"/>
    <designation>
      <use>
        <system
                value="https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source"/>
        <code value="TS"/>
      </use>
      <value value="Transcriptomics"/>
    </designation>
  </concept>
  <concept>
    <code value="EPI"/>
    <display value="Epigenomics"/>
    <designation>
      <use>
        <system
                value="https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source"/>
        <code value="EPI"/>
      </use>
      <value value="Epigenomics"/>
    </designation>
  </concept>
  <concept>
    <code value="PRO"/>
    <display value="Proteomics"/>
    <designation>
      <use>
        <system
                value="https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source"/>
        <code value="PRO"/>
      </use>
      <value value="Proteomics"/>
    </designation>
  </concept>
  <concept>
    <code value="MUL"/>
    <display value="Multi-omic"/>
    <designation>
      <use>
        <system
                value="https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source"/>
        <code value="MUL"/>
      </use>
      <value value="Multi-omic"/>
    </designation>
  </concept>
  <concept>
    <code value="CLI"/>
    <display value="Clinical"/>
    <designation>
      <use>
        <system
                value="https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source"/>
        <code value="CLI"/>
      </use>
      <value value="Clinical"/>
    </designation>
  </concept>
  <concept>
    <code value="TSC"/>
    <display value="Transcriptomic Single Cell"/>
    <designation>
      <use>
        <system
                value="https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source"/>
        <code value="TSC"/>
      </use>
      <value value="Transcriptomic Single Cell"/>
    </designation>
    <property>
      <code value="deprecated"/>
      <valueDateTime value="2026-07-27"/>
    </property>
  </concept>
  <concept>
    <code value="GSC"/>
    <display value="Genomic Single Cell"/>
    <designation>
      <use>
        <system
                value="https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source"/>
        <code value="GSC"/>
      </use>
      <value value="Genomic Single Cell"/>
    </designation>
    <property>
      <code value="deprecated"/>
      <valueDateTime value="2026-07-27"/>
    </property>
  </concept>
</CodeSystem>