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: Ferlab.bio CodeSystem/sequencing-experiment-source - TTL Representation

Active as of 2026-08-05

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

<http://hl7.org/fhir/CodeSystem/sequencing-experiment-source> a fhir:CodeSystem ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:Resource.id [ fhir:value "sequencing-experiment-source"] ;
  fhir:DomainResource.text [
     fhir:Narrative.status [ fhir:value "generated" ] ;
     fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: CodeSystem sequencing-experiment-source</b></p><a name=\"sequencing-experiment-source\"> </a><a name=\"hcsequencing-experiment-source\"> </a><p><b>Properties</b></p><p><b>This code system defines the following properties for its concepts</b></p><table class=\"grid\"><tr><td><b>Name</b></td><td><b>Code</b></td><td><b>URI</b></td><td><b>Type</b></td><td><b>Description</b></td></tr><tr><td>Deprecated</td><td>deprecated</td><td>http://hl7.org/fhir/concept-properties#deprecated</td><td>dateTime</td><td>The date at which a concept was deprecated. Concepts that are deprecated but not inactive can still be used, but their use is discouraged.</td></tr></table><p><b>Concepts</b></p><p>This case-sensitive code system <code>https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Deprecated</b></td></tr><tr><td style=\"white-space:nowrap\">GEN<a name=\"sequencing-experiment-source-GEN\"> </a></td><td>Genomics</td><td/></tr><tr><td style=\"white-space:nowrap\">TS<a name=\"sequencing-experiment-source-TS\"> </a></td><td>Transcriptomics</td><td/></tr><tr><td style=\"white-space:nowrap\">EPI<a name=\"sequencing-experiment-source-EPI\"> </a></td><td>Epigenomics</td><td/></tr><tr><td style=\"white-space:nowrap\">PRO<a name=\"sequencing-experiment-source-PRO\"> </a></td><td>Proteomics</td><td/></tr><tr><td style=\"white-space:nowrap\">MUL<a name=\"sequencing-experiment-source-MUL\"> </a></td><td>Multi-omic</td><td/></tr><tr><td style=\"white-space:nowrap\">CLI<a name=\"sequencing-experiment-source-CLI\"> </a></td><td>Clinical</td><td/></tr><tr><td style=\"white-space:nowrap\">TSC<a name=\"sequencing-experiment-source-TSC\"> </a></td><td>Transcriptomic Single Cell</td><td>2026-07-27</td></tr><tr><td style=\"white-space:nowrap\">GSC<a name=\"sequencing-experiment-source-GSC\"> </a></td><td>Genomic Single Cell</td><td>2026-07-27</td></tr></table></div>"
  ] ;
  fhir:CodeSystem.url [ fhir:value "https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source"] ;
  fhir:CodeSystem.version [ fhir:value "0.1.0"] ;
  fhir:CodeSystem.name [ fhir:value "SequencingExperimentSource"] ;
  fhir:CodeSystem.title [ fhir:value "Ferlab.bio CodeSystem/sequencing-experiment-source"] ;
  fhir:CodeSystem.status [ fhir:value "active"] ;
  fhir:CodeSystem.experimental [ fhir:value "false"^^xsd:boolean] ;
  fhir:CodeSystem.date [ fhir:value "2026-08-05T14:46:26+00:00"^^xsd:dateTime] ;
  fhir:CodeSystem.publisher [ fhir:value "Ferlab.bio"] ;
  fhir:CodeSystem.contact [
     fhir:index 0 ;
     fhir:ContactDetail.name [ fhir:value "Ferlab.bio" ] ;
     fhir:ContactDetail.telecom [
       fhir:index 0 ;
       fhir:ContactPoint.system [ fhir:value "url" ] ;
       fhir:ContactPoint.value [ fhir:value "http://example.org/example-publisher" ]
     ]
  ] ;
  fhir:CodeSystem.description [ fhir:value "Experimental category of the experiment (Genomics, Transcriptomics, Epigenomics, Proteomics, Multi-omic, Clinical)."] ;
  fhir:CodeSystem.caseSensitive [ fhir:value "true"^^xsd:boolean] ;
  fhir:CodeSystem.content [ fhir:value "complete"] ;
  fhir:CodeSystem.count [ fhir:value "8"^^xsd:nonNegativeInteger] ;
  fhir:CodeSystem.property [
     fhir:index 0 ;
     fhir:CodeSystem.property.code [ fhir:value "deprecated" ] ;
     fhir:CodeSystem.property.uri [ fhir:value "http://hl7.org/fhir/concept-properties#deprecated" ] ;
     fhir:CodeSystem.property.description [ fhir:value "The date at which a concept was deprecated. Concepts that are deprecated but not inactive can still be used, but their use is discouraged." ] ;
     fhir:CodeSystem.property.type [ fhir:value "dateTime" ]
  ] ;
  fhir:CodeSystem.concept [
     fhir:index 0 ;
     fhir:CodeSystem.concept.code [ fhir:value "GEN" ] ;
     fhir:CodeSystem.concept.display [ fhir:value "Genomics" ] ;
     fhir:CodeSystem.concept.designation [
       fhir:index 0 ;
       fhir:CodeSystem.concept.designation.use [
         fhir:Coding.system [ fhir:value "https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source" ] ;
         fhir:Coding.code [ fhir:value "GEN" ]
       ] ;
       fhir:CodeSystem.concept.designation.value [ fhir:value "Genomics" ]
     ]
  ], [
     fhir:index 1 ;
     fhir:CodeSystem.concept.code [ fhir:value "TS" ] ;
     fhir:CodeSystem.concept.display [ fhir:value "Transcriptomics" ] ;
     fhir:CodeSystem.concept.designation [
       fhir:index 0 ;
       fhir:CodeSystem.concept.designation.use [
         fhir:Coding.system [ fhir:value "https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source" ] ;
         fhir:Coding.code [ fhir:value "TS" ]
       ] ;
       fhir:CodeSystem.concept.designation.value [ fhir:value "Transcriptomics" ]
     ]
  ], [
     fhir:index 2 ;
     fhir:CodeSystem.concept.code [ fhir:value "EPI" ] ;
     fhir:CodeSystem.concept.display [ fhir:value "Epigenomics" ] ;
     fhir:CodeSystem.concept.designation [
       fhir:index 0 ;
       fhir:CodeSystem.concept.designation.use [
         fhir:Coding.system [ fhir:value "https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source" ] ;
         fhir:Coding.code [ fhir:value "EPI" ]
       ] ;
       fhir:CodeSystem.concept.designation.value [ fhir:value "Epigenomics" ]
     ]
  ], [
     fhir:index 3 ;
     fhir:CodeSystem.concept.code [ fhir:value "PRO" ] ;
     fhir:CodeSystem.concept.display [ fhir:value "Proteomics" ] ;
     fhir:CodeSystem.concept.designation [
       fhir:index 0 ;
       fhir:CodeSystem.concept.designation.use [
         fhir:Coding.system [ fhir:value "https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source" ] ;
         fhir:Coding.code [ fhir:value "PRO" ]
       ] ;
       fhir:CodeSystem.concept.designation.value [ fhir:value "Proteomics" ]
     ]
  ], [
     fhir:index 4 ;
     fhir:CodeSystem.concept.code [ fhir:value "MUL" ] ;
     fhir:CodeSystem.concept.display [ fhir:value "Multi-omic" ] ;
     fhir:CodeSystem.concept.designation [
       fhir:index 0 ;
       fhir:CodeSystem.concept.designation.use [
         fhir:Coding.system [ fhir:value "https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source" ] ;
         fhir:Coding.code [ fhir:value "MUL" ]
       ] ;
       fhir:CodeSystem.concept.designation.value [ fhir:value "Multi-omic" ]
     ]
  ], [
     fhir:index 5 ;
     fhir:CodeSystem.concept.code [ fhir:value "CLI" ] ;
     fhir:CodeSystem.concept.display [ fhir:value "Clinical" ] ;
     fhir:CodeSystem.concept.designation [
       fhir:index 0 ;
       fhir:CodeSystem.concept.designation.use [
         fhir:Coding.system [ fhir:value "https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source" ] ;
         fhir:Coding.code [ fhir:value "CLI" ]
       ] ;
       fhir:CodeSystem.concept.designation.value [ fhir:value "Clinical" ]
     ]
  ], [
     fhir:index 6 ;
     fhir:CodeSystem.concept.code [ fhir:value "TSC" ] ;
     fhir:CodeSystem.concept.display [ fhir:value "Transcriptomic Single Cell" ] ;
     fhir:CodeSystem.concept.designation [
       fhir:index 0 ;
       fhir:CodeSystem.concept.designation.use [
         fhir:Coding.system [ fhir:value "https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source" ] ;
         fhir:Coding.code [ fhir:value "TSC" ]
       ] ;
       fhir:CodeSystem.concept.designation.value [ fhir:value "Transcriptomic Single Cell" ]
     ] ;
     fhir:CodeSystem.concept.property [
       fhir:index 0 ;
       fhir:CodeSystem.concept.property.code [ fhir:value "deprecated" ] ;
       fhir:CodeSystem.concept.property.valueDateTime [ fhir:value "2026-07-27"^^xsd:date ]
     ]
  ], [
     fhir:index 7 ;
     fhir:CodeSystem.concept.code [ fhir:value "GSC" ] ;
     fhir:CodeSystem.concept.display [ fhir:value "Genomic Single Cell" ] ;
     fhir:CodeSystem.concept.designation [
       fhir:index 0 ;
       fhir:CodeSystem.concept.designation.use [
         fhir:Coding.system [ fhir:value "https://fhir.cqdg.ca/CodeSystem/sequencing-experiment-source" ] ;
         fhir:Coding.code [ fhir:value "GSC" ]
       ] ;
       fhir:CodeSystem.concept.designation.value [ fhir:value "Genomic Single Cell" ]
     ] ;
     fhir:CodeSystem.concept.property [
       fhir:index 0 ;
       fhir:CodeSystem.concept.property.code [ fhir:value "deprecated" ] ;
       fhir:CodeSystem.concept.property.valueDateTime [ fhir:value "2026-07-27"^^xsd:date ]
     ]
  ] .

# - ontology header ------------------------------------------------------------

<http://hl7.org/fhir/CodeSystem/sequencing-experiment-source.ttl> a owl:Ontology ;
  owl:imports fhir:fhir.ttl ;
  owl:versionIRI <http://build.fhir.org/CodeSystem/sequencing-experiment-source.ttl> .