0.1.0 - ci-build

CQDG_FHIR_IG - Local Development build (v0.1.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions

Example Task: Ferlab.bio Example/cqdg-task

Generated Narrative: Task CQDGTaskExample

Ferlab.bio StructureDefinition/workflow

Ferlab.bio StructureDefinition/sequencing-experiment

  • runName: 1898
  • platform: Illumina NovaSeq 6000 S4 PE150
  • isPairedEnd: true
  • readLength: 151,8,8,151
  • experimentalStrategy: Ferlab.bio CodeSystem/experimental-strategy WXS: Whole Exome Sequencing
  • runDate: 2020-11-06
  • labAliquotId: MPS12348274-B04
  • ldmSampleId: S03344

status: Completed

intent: order

priority: Routine

code: Reads Alignement Bioinformatic Analysis

requester: Organization CQDG

owner: Organization CQDG

Inputs

-TypeValue[x]
*Analysed sampleSubmitter Sample ID: SpecimenExample

output

type: Aligned Reads

value: DocumentReference: status = current; type = Sequencing Data Supplement; category = Genomics; securityLabel = test

output

type: SNV

value: DocumentReference: status = current; type = Sequencing Data Supplement; category = Genomics; securityLabel = test

output

type: Germline CNV

value: DocumentReference: status = current; type = Aligned Reads; category = Genomics; securityLabel = test

output

type: Sequencing-data-supplement

value: DocumentReference: status = current; type = Aligned Reads; category = Genomics; securityLabel = test