0.1.0 - ci-build

CQDG_FHIR_IG - Local Development build (v0.1.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions

: Ferlab.bio Example/specimen1 - TTL Representation

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

<http://hl7.org/fhir/Specimen/SpecimenExample> a fhir:Specimen ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:Resource.id [ fhir:value "SpecimenExample"] ;
  fhir:Resource.meta [
     fhir:Meta.profile [
       fhir:value "https://fhir.cqdg.ca/StructureDefinition/cqdg-specimen" ;
       fhir:index 0 ;
       fhir:link <https://fhir.cqdg.ca/StructureDefinition/cqdg-specimen>
     ] ;
     fhir:Meta.tag [
       fhir:index 0 ;
       fhir:Coding.code [ fhir:value "CAG" ]
     ]
  ] ;
  fhir:DomainResource.text [
     fhir:Narrative.status [ fhir:value "extensions" ] ;
     fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: Specimen SpecimenExample</b></p><a name=\"SpecimenExample\"> </a><a name=\"hcSpecimenExample\"> </a><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\"/><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-cqdg-specimen.html\">Ferlab.bio StructureDefinition/cqdg-specimen</a></p><p style=\"margin-bottom: 0px\">Tag: </p></div><p><b>Ferlab.bio Extension/tumor-normal-designation</b>: <span title=\"Codes:{https://fhir.cqdg.ca/CodeSystem/cqdg-tumor-normal-designation Tumor}\">Tumor</span></p><p><b>Ferlab.bio Extension/age-at-event</b>: <span title=\"Codes:{http://purl.obolibrary.org/obo/hp.owl HP:0030674}\">Antenatal onset</span></p><blockquote><p><b>Ferlab.bio Extension/cancer-biospecimen-anatomic-location</b></p><ul><li>ncitCode: <span title=\"Codes:{http://purl.obolibrary.org/obo/ncit.owl C12434}\">C12434</span></li><li>sourceText: Left lung lobe</li></ul></blockquote><blockquote><p><b>Ferlab.bio Extension/tumor-histological-type</b></p><ul><li>ncitCode: <span title=\"Codes:{http://purl.obolibrary.org/obo/ncit.owl C12455}\">C12455</span></li><li>sourceText: Something carcinoma</li></ul></blockquote><p><b>Ferlab.bio Extension/CancerBiospecimenType</b>: <span title=\"Codes:{http://purl.obolibrary.org/obo/ncit.owl C156445}\">C156445</span></p><p><b>identifier</b>: <code>https://fhir.cqdg.ca/fhir/Specimen</code>/SpecimenExample, cag_sp_25565 (use: secondary, )</p><p><b>type</b>: <span title=\"Codes:{http://purl.obolibrary.org/obo/ncit.owl C12434}\">DNA</span></p><p><b>subject</b>: <a href=\"Patient-PatientExample.html\">Anonymous Patient (no stated gender), DoB Unknown ( 343434343434 (use: secondary, ))</a></p></div>"
  ] ;
  fhir:DomainResource.extension [
     fhir:index 0 ;
     fhir:Extension.url [ fhir:value "https://fhir.cqdg.ca/StructureDefinition/TumorNormalDesignation" ] ;
     fhir:Extension.valueCodeableConcept [
       fhir:CodeableConcept.coding [
         fhir:index 0 ;
         fhir:Coding.system [ fhir:value "https://fhir.cqdg.ca/CodeSystem/cqdg-tumor-normal-designation" ] ;
         fhir:Coding.code [ fhir:value "Tumor" ]
       ]
     ]
  ], [
     fhir:index 1 ;
     fhir:Extension.url [ fhir:value "https://fhir.cqdg.ca/StructureDefinition/AgeAtEvent" ] ;
     fhir:Extension.valueCodeableConcept [
       fhir:CodeableConcept.coding [
         fhir:index 0 ;
         fhir:Coding.system [ fhir:value "http://purl.obolibrary.org/obo/hp.owl" ] ;
         fhir:Coding.code [ fhir:value "HP:0030674" ]
       ]
     ]
  ], [
     fhir:index 2 ;
     fhir:Element.extension [
       fhir:index 0 ;
       fhir:Extension.url [ fhir:value "ncitCode" ] ;
       fhir:Extension.valueCodeableConcept [
         fhir:CodeableConcept.coding [
           fhir:index 0 ;
           fhir:Coding.system [ fhir:value "http://purl.obolibrary.org/obo/ncit.owl" ] ;
           fhir:Coding.code [ fhir:value "C12434" ]
         ]
       ]
     ], [
       fhir:index 1 ;
       fhir:Extension.url [ fhir:value "sourceText" ] ;
       fhir:Extension.valueString [ fhir:value "Left lung lobe" ]
     ] ;
     fhir:Extension.url [ fhir:value "https://fhir.cqdg.ca/StructureDefinition/CancerBiospecimenAnatomicLocation" ]
  ], [
     fhir:index 3 ;
     fhir:Element.extension [
       fhir:index 0 ;
       fhir:Extension.url [ fhir:value "ncitCode" ] ;
       fhir:Extension.valueCodeableConcept [
         fhir:CodeableConcept.coding [
           fhir:index 0 ;
           fhir:Coding.system [ fhir:value "http://purl.obolibrary.org/obo/ncit.owl" ] ;
           fhir:Coding.code [ fhir:value "C12455" ]
         ]
       ]
     ], [
       fhir:index 1 ;
       fhir:Extension.url [ fhir:value "sourceText" ] ;
       fhir:Extension.valueString [ fhir:value "Something carcinoma" ]
     ] ;
     fhir:Extension.url [ fhir:value "https://fhir.cqdg.ca/StructureDefinition/TumorHistologicalType" ]
  ], [
     fhir:index 4 ;
     fhir:Extension.url [ fhir:value "https://fhir.cqdg.ca/StructureDefinition/CancerBiospecimenType" ] ;
     fhir:Extension.valueCodeableConcept [
       fhir:CodeableConcept.coding [
         fhir:index 0 ;
         fhir:Coding.system [ fhir:value "http://purl.obolibrary.org/obo/ncit.owl" ] ;
         fhir:Coding.code [ fhir:value "C156445" ]
       ]
     ]
  ] ;
  fhir:Specimen.identifier [
     fhir:index 0 ;
     fhir:Identifier.system [ fhir:value "https://fhir.cqdg.ca/fhir/Specimen" ] ;
     fhir:Identifier.value [ fhir:value "SpecimenExample" ]
  ], [
     fhir:index 1 ;
     fhir:Identifier.use [ fhir:value "secondary" ] ;
     fhir:Identifier.value [ fhir:value "cag_sp_25565" ]
  ] ;
  fhir:Specimen.type [
     fhir:CodeableConcept.coding [
       fhir:index 0 ;
       fhir:Coding.system [ fhir:value "http://purl.obolibrary.org/obo/ncit.owl" ] ;
       fhir:Coding.code [ fhir:value "C12434" ] ;
       fhir:Coding.display [ fhir:value "DNA" ]
     ]
  ] ;
  fhir:Specimen.subject [
     fhir:link <http://hl7.org/fhir/Patient/PatientExample> ;
     fhir:Reference.reference [ fhir:value "Patient/PatientExample" ]
  ] .

<http://hl7.org/fhir/Patient/PatientExample> a fhir:Patient .

# - ontology header ------------------------------------------------------------

<http://hl7.org/fhir/Specimen/SpecimenExample.ttl> a owl:Ontology ;
  owl:imports fhir:fhir.ttl ;
  owl:versionIRI <http://build.fhir.org/Specimen/SpecimenExample.ttl> .