Cqgc Implementation Guide
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: Ferlab.bio CodeSystem/bioinfo-analysis-code - TTL Representation

Active as of 2025-08-25

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:CodeSystem ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "bioinfo-analysis-code"] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: CodeSystem bioinfo-analysis-code</b></p><a name=\"bioinfo-analysis-code\"> </a><a name=\"hcbioinfo-analysis-code\"> </a><p>This case-sensitive code system <code>http://fhir.cqgc.ferlab.bio/CodeSystem/bioinfo-analysis-code</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>French (fr)</b></td></tr><tr><td style=\"white-space:nowrap\">RABA<a name=\"bioinfo-analysis-code-RABA\"> </a></td><td>Reads Alignement Bioinformatic Analysis</td><td>Analyse bioinformatique d'alignement de fragments</td></tr><tr><td style=\"white-space:nowrap\">SNVC<a name=\"bioinfo-analysis-code-SNVC\"> </a></td><td>SNV Calling Bioinformatic Analysis</td><td>Analyse bioinformatique d'appel de SNV</td></tr><tr><td style=\"white-space:nowrap\">QCBA<a name=\"bioinfo-analysis-code-QCBA\"> </a></td><td>Quality control Bioinformatic Analysis</td><td>Analyse bioinformatique de controle de qualité</td></tr><tr><td style=\"white-space:nowrap\">GEBA<a name=\"bioinfo-analysis-code-GEBA\"> </a></td><td>Germline Exome Bioinformatic Analysis</td><td>Analyse bioinformatique d'exomes germinaux</td></tr><tr><td style=\"white-space:nowrap\">PEBA<a name=\"bioinfo-analysis-code-PEBA\"> </a></td><td>Pseudogene Bioinformatic Analysis</td><td>Analyse bioinformatique de pseudogènes</td></tr><tr><td style=\"white-space:nowrap\">TRBA<a name=\"bioinfo-analysis-code-TRBA\"> </a></td><td>Transcriptome Bioinformatic Analysis</td><td>Analyse bioinformatique de transcriptomes</td></tr><tr><td style=\"white-space:nowrap\">TEBA<a name=\"bioinfo-analysis-code-TEBA\"> </a></td><td>Tumoral Exome Bioinformatic Analysis</td><td>Analyse bioinformatique d'exomes tumoraux</td></tr><tr><td style=\"white-space:nowrap\">TNEBA<a name=\"bioinfo-analysis-code-TNEBA\"> </a></td><td>Tumor-Normal Exomes Bioinformatic Analysis</td><td>Analyse bioinformatique des exomes tumoraux et normaux</td></tr></table></div>"^^rdf:XMLLiteral
  ] ; # 
  fhir:url [ fhir:v "http://fhir.cqgc.ferlab.bio/CodeSystem/bioinfo-analysis-code"^^xsd:anyURI] ; # 
  fhir:version [ fhir:v "0.1.0"] ; # 
  fhir:name [ fhir:v "bioinfo-analysis-code"] ; # 
  fhir:title [ fhir:v "Bioinformatic analysis codes"] ; # 
  fhir:status [ fhir:v "active"] ; # 
  fhir:experimental [ fhir:v false] ; # 
  fhir:date [ fhir:v "2025-08-25T15:12:45+00:00"^^xsd:dateTime] ; # 
  fhir:publisher [ fhir:v "Ferlab.bio"] ; # 
  fhir:contact ( [
fhir:name [ fhir:v "Cqgc" ] ;
    ( fhir:telecom [
fhir:system [ fhir:v "email" ] ;
fhir:value [ fhir:v "mailto:support@ferlab.bio" ]     ] )
  ] ) ; # 
  fhir:description [ fhir:v "Bioinformatic analysis code system"] ; # 
  fhir:caseSensitive [ fhir:v true] ; # 
  fhir:content [ fhir:v "complete"] ; # 
  fhir:count [ fhir:v "4"^^xsd:nonNegativeInteger] ; # 
  fhir:concept ( [
fhir:code [ fhir:v "RABA" ] ;
fhir:display [ fhir:v "Reads Alignement Bioinformatic Analysis" ] ;
    ( fhir:designation [
fhir:language [ fhir:v "fr" ] ;
fhir:value [ fhir:v "Analyse bioinformatique d'alignement de fragments" ]     ] )
  ] [
fhir:code [ fhir:v "SNVC" ] ;
fhir:display [ fhir:v "SNV Calling Bioinformatic Analysis" ] ;
    ( fhir:designation [
fhir:language [ fhir:v "fr" ] ;
fhir:value [ fhir:v "Analyse bioinformatique d'appel de SNV" ]     ] )
  ] [
fhir:code [ fhir:v "QCBA" ] ;
fhir:display [ fhir:v "Quality control Bioinformatic Analysis" ] ;
    ( fhir:designation [
fhir:language [ fhir:v "fr" ] ;
fhir:value [ fhir:v "Analyse bioinformatique de controle de qualité" ]     ] )
  ] [
fhir:code [ fhir:v "GEBA" ] ;
fhir:display [ fhir:v "Germline Exome Bioinformatic Analysis" ] ;
    ( fhir:designation [
fhir:language [ fhir:v "fr" ] ;
fhir:value [ fhir:v "Analyse bioinformatique d'exomes germinaux" ]     ] )
  ] [
fhir:code [ fhir:v "PEBA" ] ;
fhir:display [ fhir:v "Pseudogene Bioinformatic Analysis" ] ;
    ( fhir:designation [
fhir:language [ fhir:v "fr" ] ;
fhir:value [ fhir:v "Analyse bioinformatique de pseudogènes" ]     ] )
  ] [
fhir:code [ fhir:v "TRBA" ] ;
fhir:display [ fhir:v "Transcriptome Bioinformatic Analysis" ] ;
    ( fhir:designation [
fhir:language [ fhir:v "fr" ] ;
fhir:value [ fhir:v "Analyse bioinformatique de transcriptomes" ]     ] )
  ] [
fhir:code [ fhir:v "TEBA" ] ;
fhir:display [ fhir:v "Tumoral Exome Bioinformatic Analysis" ] ;
    ( fhir:designation [
fhir:language [ fhir:v "fr" ] ;
fhir:value [ fhir:v "Analyse bioinformatique d'exomes tumoraux" ]     ] )
  ] [
fhir:code [ fhir:v "TNEBA" ] ;
fhir:display [ fhir:v "Tumor-Normal Exomes Bioinformatic Analysis" ] ;
    ( fhir:designation [
fhir:language [ fhir:v "fr" ] ;
fhir:value [ fhir:v "Analyse bioinformatique des exomes tumoraux et normaux" ]     ] )
  ] ) . #